Build Your Own Scanning Tunneling Microscope 175
I don't want to spen writes "For all you fans of nanotech out there, a friend just posted me a link to instructions for building a scanning tunnelling microscope, from the University of Muenster. Interestingly, their licensing terms sound open source-ish to me: '(... We grant everybody the right to construct the microscope using the here-published design for private or educational purposes. On these web pages all necessary diagrams, drawings, material descriptions and software-source-codes are published for free access. While granting the right to build the microscope we make it mandatory that new developments, improvements or other applications of our design are also made openly available for private or educational purposes...)'"
Visual Basic? (Score:3, Funny)
Seriously though, looks like a great summer project.. Not to mention my college will now have a SEM because of these plans
Re:Visual Basic? (Score:1)
Re:Visual Basic? (Score:4, Informative)
And it's not SEM, it's STM. Sem is great for making pictures of insects and what not, STM is great for tracing out the p-orbitals of graphite. BIG difference (not your error, but as long as I'm clarifing, why not hit that too).
Propose a sputtering chamer or a PVD chamber, they'd probably be much cheaper to build and can be used to make other stuff. Which then one could look at with either an SEM or STM if one chose.
Goto industrial and university auctions too. I've hear tell of people giving TEM's away to whomever was willing to transport them (not that an isolation pad on which to set it is within the means of Young Scientists). But still.
saw this article a few months back on other sites (Score:2, Interesting)
Re:saw this article a few months back on other sit (Score:3, Informative)
Re:saw this article a few months back on other sit (Score:3, Informative)
Re:saw this article a few months back on other sit (Score:2)
Re:saw this article a few months back on other sit (Score:1)
Re:saw this article a few months back on other sit (Score:3, Informative)
Re:saw this article a few months back on other sit (Score:2, Informative)
Re:saw this article a few months back on other sit (Score:2)
Does anyone make a low cost version that is already built?
Re:saw this article a few months back on other sit (Score:1)
Shows a mounted sample on the stage [iastate.edu]
Likewise, I do not believe that Bausch & Lomb makes EM equipment either.
Now, I may be wrong... if so, no offense taken, but this just seems incorrect to me.
Ac
Re:saw this article a few months back on other sit (Score:2)
Srpechten de German? (Score:3, Funny)
Re:Srpechten de German? (Score:5, Funny)
Alles touristen und non-technischen looken peepers!
Das computermachine ist nicht fuer gefingerpoken und mittengrabben.
Ist easy schnappen der springenwerk, blowenfusen und poppencorken
mit spitzensparken. Ist nicht fuer gewerken bei das dumpkopfen.
Das rubbernecken sichtseeren keepen das cotten-pickenen hans in das
pockets muss; relaxen und watchen das blinkenlichten.
couldn't help myself [catb.org]
Re:Srpechten de German? (Score:4, Funny)
Alright. It should be "Sprechen Sie Deutsch?" All set?
When can I buy 1 from toys R us? (Score:1)
seriously, the open sourcish license is interesting. It would work very well in an academic setting, which is analogous to actual OSS: people creating "products" with their primary goal not being money, and the GPLish license prevents it from being incorporated into proprietary, commercial products.
I don't know if you can do anything meaningful in your mom's basement with the STM kit, but interesting nonetheless.
What?! No Linux Version?! (Score:2, Funny)
The software was written in Visual Basic 6 for Windows
Great! But I wanted to control the STM from my linux box
It already controls my lights, coffie maker, telephone, network, CD player...
NeoThermic
Re:What?! No Linux Version?! (Score:1)
It'll suck then. Using VB is like masturbating with a cheese grater. It should be made illegal =/
Re:What?! No Linux Version?! (Score:2, Funny)
What I do with MY cheese grater in MY house is non of your business!
Make it Illegal!! What's next? Make it illegal to make a hole in a watermelon for when I feel lonely? Because watermelons have feelings? C'mon!
Re:What?! No Linux Version?! (Score:2)
Re:What?! No Linux Version?! (Score:1)
Looks pretty swtraight forward to me....Then again I convert old VB code pretty much all day long..
omg! (Score:5, Funny)
You mean this is not like, say for a example, some greedy physician who comes up with a slightly different way of suturing someone with existing tools, patenting said technique, and then demanding worldwide royalties????
The end is near!
--
Re:omg! (Score:2)
These guys don't know how the rules work.
If they put out the design publicly, and they don't have a patent, anyone can build one based on their design, for any purpose. Copyright protects their design document, but does not affect what anyone who legally obtains the design document does (e.g. builds an STM).
HA HA!! (Score:1, Offtopic)
I win!!
Re:HA HA!! (Score:2)
a free slot for ISA cards (Score:4, Insightful)
Well, I still have this covered, but not many of my friends do.
Re:a free slot for ISA cards (Score:1)
Re:a free slot for ISA cards (Score:4, Informative)
The design as given requires a ISA slot because of the type A/D converter card they selected. If you do not have an ISA slot available, I am sure a PCI based, or even a USB based analog to digital converter can be found. It would probably be a good idea to change the A/D, as the one used has a 100khz refresh rate. I am sure that there are cards out there that refresh at a much quicker rate, thereby allowing improvements in other areas of the design. Just be aware that the software would have to be modified because of the different card, but that should not be a difficult matter for anyone attempting this project.
Re:a free slot for ISA cards (Score:2, Interesting)
Re:a free slot for ISA cards (Score:4, Informative)
Re:a free slot for ISA cards (Score:1)
Re:a free slot for ISA cards (Score:2, Informative)
There are several reasons why you would not want to use a sound card's line inputs. One the most important is that a sound card's refresh rate is not continuously adjustable over the range which it can operate. I have not messed much with sound cards lately as ripping CDs and working with sound is not what I am into, but I seem to remember that sound cards sample as certain predetermined rates like 8k/sec, 16k/sec, 22k/sec and 44k/sec. I am sure sound cards can sample at higher rates, but if you need to
Just get an A/D chip (Score:2)
Question to all you bioinformaticians (Score:3, Interesting)
Re:Question to all you bioinformaticians (Score:5, Informative)
Atomic force microsopes on the other hand can do some very neat work with small organic particals, but seperating something like an HIV from solution is still difficult, and usually involved crystalization.
Re:Question to all you bioinformaticians (Score:1)
Re:Question to all you bioinformaticians (Score:4, Informative)
Re:Question to all you bioinformaticians (Score:1)
You may also be able to use MAS to find information about a crystal via NMR but I have never heard of that being done (havent looked lately). NMR crystalography
Re:Question to all you bioinformaticians (Score:3, Informative)
Re:Question to all you bioinformaticians (Score:4, Informative)
Re:Question to all you bioinformaticians (Score:4, Informative)
question seeing as I do STM research for a living.
Your second question is easier to answer, so I'll
do that first:
there are two ways, either you put down enough
of them to assure there will be a molecule in the
range of your scanner whereever you approach
or you use some other technique like lithography
to make small structures then another technique
to deposit your molecules near those structures
then (if you got the microscope that allows it)
position your tip optically near the structure
and spend days on looking around with STM until
you find it.
Now you first question. STM can be used to find
some structural info from large molecules. My lab
has done some research on nanotubes and you can
get atomic resolution on those and then determine
their helicity. People have also imaged bio stuff
and for some smaller molecules have seen the
structure. Even DNA has been imaged. That said,
STM is not a great structure probe, it is a great
probe of electronic states.
Last word of warning: people rarely realize that
STM in air is not going to tell you anything
that you can rely on physics-wise. The reason is
that all surfaces exposed to air are covered in a
thin layer of water which makes the interpretation
of data hard. What they show on that page is a toy
though well-thought-out and maybe even useful to
some. Seeing atomic steps on gold and "atomic"
resolution on HOPG is not hard, just don't hold
your breath for something like atomic resolution
on gold, or silicon, or anything else really.
For that you at least need a UHV system.
Cheers.
Re:Question to all you bioinformaticians (Score:2, Interesting)
(sitting 1 meter from a rebuilt Leybold Turbovac PT 50, and other parts)
I recall the ancient SEM at the first place I worked. 1960s equipment. I got okay images after it was cleaned up, and was only drawing vacuum through an old piston-pump. Ex-refridgeration pumps can d
Re:Question to all you bioinformaticians (Score:2)
Building a UHV system (10^-10 torr type vacuum)
is expensive though not hard. Part of it is that
you'll need quality metal seal flanges to connect
parts of your system, another part is that you
need an ion pump because turbo and mechnical
pumps introduce too much vibration. Of course
if you got the money you could also dump it all
inside a liquid helium dewar and be done with
cryopumping alone.
If you are scavenging equipment then look for
a mechanical, a turbo and an ion pump (you'll be
Re:Question to all you bioinformaticians (Score:2)
I wouldn't trust vibration isolation of a
refurbished optical table so those parts
most likely have to be new. That's 25K right
there. If you got access to a lot of stainless
steel tubing and are good with welding AND have
a way to electropolish the chamber in the end,
you can cut costs drastically but most people
even at large universities don't have that.
(BTW, I have first hand experience with old
optical tables and their vibration characteristics).
If you have big,
Re:Question to all you bioinformaticians (Score:2)
Usually that would refer to Scanning Electron
Microscope or Transmission Electron Microscope
or a variation similar to those. These techniques
use electrons similar to how a normal microscope
uses photons.
An STM is different entirely. It is a local probe
technique, there is no electron beam. It does
not involve scattering, only tunneling. Its
scale is sub-angstrom resolution where SEM and TEM
stuff cannot reach even now with much improved
electron optics. This is why
Re:Question to all you bioinformaticians (Score:2)
that level of precision, you have no choice but to
fight all noise.
Prions (Score:2, Interesting)
Re:Prions (Score:2, Informative)
Sad face? (Score:5, Funny)
heh, did anyone else quickly glance at that and think he was making a sad crying face because it sounded open source?
"Uh oh! It sounds like open source!
Re:Sad face? (Score:2, Funny)
Re:Sad face? (Score:1)
open source-ish? (Score:4, Informative)
With BSD or GPL style licenses you are actually allowed to use the copyrighted work in an commercial setting, just not to sell it. For instance a commercial company might run their web server using GPL licensed software.
With this not only do they retain the exclusive commercial rights, but the license might in fact be read as an attempt to force you to turn over any improvements on their design.
So if you make an improvement, does this mean that you have implicitely granted the University of Muenster the rights for commercial exploitation of your own improvment by accepting their license in the first place?
This does not sound "open source-ish" to me, it sounds like out right theft.
PS: Please ignore any bad spellings/grammar in my english or at least be polite when telling me
Re:open source-ish? (Score:2)
'Openly available' != 'turn over to the University of Muenster'
Re:open source-ish? (Score:1)
Perhaps not, but I dont think that license was very 'Open Source' anyway. It is however very much 'free beer'.
Re:open source-ish? (Score:1, Insightful)
You're one of those people who when a restaurant gives a free lunch gets pissed off because you can't sell it to another customer.
There is no out right theft. You don't have to build one of these STM's. If you want to, then follow the license. Otherwise go somewhere else and shut up. This group is offerring you something for free. Just because they aren't also giving you the keys to their car or their house doesn't make them evil.
Re:open source-ish? (Score:2, Interesting)
I dont mind that I cannot sell their invention, of course not. But I do mind having to give up for free any improvements I make unless *they too* give up this right.
This is what "Open Source" is all about, freedom of information not "free beer".
Ever read the GPL? (Score:2)
Re:Ever read the GPL? (Score:2)
With the GPL they not only could do that. But they could improve the device (perhaps porting the software to linux and replacing the card with a PCI Version for starters) and distribute that improvement whether this initial project decided to or not.
That reveals another big disadvantage. With the next server upgrade at the University this will likely disappear (like most
open design scientific instruments (Score:2, Informative)
Ok cool but why not just buy one ? (Score:3, Informative)
Re:Ok cool but why not just buy one ? (Score:3)
Muenster ist ein schoener Stadt! (Score:3, Informative)
Muenster is a wonderful college town, as well as a place of historical significance (30 years war ended there). The hospital associated with the university, and thus the medical program, are well respected across Europe. (Comparible to Mayo / Johns Hopkins / Mass. General here in the US).
Anyway, while it is surprising to see this on the front of
Posting AC because I believe in privacy on the net
Open source / Free Software != Non-commercial (Score:1, Offtopic)
OSI [opensource.org] talks a lot about including open software in the commercial world.
Closing free software to commercial entities is an idea roundly rejected by modern free software thinkers.
More STM info (Score:5, Informative)
Obviously there are a lot of articles on STMs in various academic journals. If you're at a university, you might start by searching in Reviews of Scientific Instruments and perhaps the Phys Rev journals.
I was involved with a STM project for a while, and our conclusion was that the 3D piezo setup is quite fragile, and extremely difficult to isolate from vibration, etc. It seemed that a better design was a so-called slip-stick walker, which uses a stage that slides on smooth rails. A tube of piezoelectric ceramic is attached and driven in such a way that it creates a series of small, sharp forces on the stage that momentarily break the static friction between the stage and base, causing it to move in small steps.
This stage is used to approach the sample to the STM tip, which is mounted on another piezo tube, and can be deflected laterally and vertically in order to do a raster scan of a small area of the surface.
The limitation to this method is that you can't scan a very large surface area. You can add a second "walker" unit underneath the first one so that you can move the sample from side to side in addition to moving it towards/away from the tip, so this would allow you to scan a stripe across the surface.
To get full 3D control, there are several designs called "beetles" (IIRC) that are described in the literature, which use a somewhat similar technique that allows more control.
Re:More STM info (Score:3, Interesting)
Besocke design is not unique in allowing full
3D approach positioning. It does have many advantages
like farly good rigidity, thermal compensation and
ease of assembly.
There are designs which are even better than
slipstick, such as the good old inchworm design
and its offshoots, especially ones designed for
low temperature operation (some are patented).
Even slip-stick isn't limited to beetles. Another
design was patented early on by Lyding and is also
thermally compen
Vibration damping (Score:5, Interesting)
We assure you, however, that hanging the scope from a thin scaffolding using light springs, and then attaching the entire setup to a huge piece of granite will not be sufficient.
On a more serious note, an STM is really easy to build, but really hard to make work. There has been more than one physics graduate student that has entered perpetual grad school limbo trying to get one of these to work. The vibration damping is just the start. Learning to etch the tungsten probes so that you get the necessary few atoms at the end is quite an ordeal. And then attaching the probe without allowing the tip to even come close to any surface. And then calibrating the piezoelectric so that the tip will be very very very close to the sample, but never touch it. You will go through 100 hand etched probes before the instrument is even grossly calibrated.
And then measuring the gap current. You learn what kind of noise a power supply really has. Getting a noise low enough so that a signal is discernible after amplification requires a power supply the likes of which few has seen. And then the noise that introduced by the amplification process. This are not your ordinary op amps. I shudder to even think about building a board that quiet.
But have fun, and remember us for you optical table needs. We are, after all, the only one who sell the genuine and otherwise real and purchasable Vibration Proof Table(TM)(patent pending).
Re:Vibration damping (Score:2, Informative)
Then about another day to learn how to cut the Pt-Ir needles to be atomic (this isn't that hard, a wire cutter worked). If you think about it there is probably a single atom at the bottom no mater what (there has to be one
Re:Vibration damping (Score:4, Interesting)
as an undergrad. I say this because the very
essense of tunneling is that it falls of as an
exponential, not as a power law.
b. I assume you were doing STM in air or else
moving a setup downstairs would have taken at
least a week to rebake the vacuum chamber. Now
in air, you have a thin layer of water on the
surface which surprisingly makes it easier to
stabilize a junction.
c. Tips aren't quite some much of a problem, I
agree with that, especially since very good tips
can be bought commercially. And cutting a wire
may work well for metals and semiconductors.
Attaching a probe is usually easy because the
only part you can't touch is the very end.
Responding to original poster:
d. There is no need to calibrate the piezo to be
able to tunnel, that's what a feedback loop is for.
You do have to have an idea of what parameters to
use so it doesn't ring.
e. In fact an ordinary op-amp will do fine and a
clean dc supply from any decent manufacturer
will do the trick. Look at bio and chemistry
literature dealing with patch clamp applications
for good references on more sophisticated designs
but it aint rocket science. The one hard part is
to make sure you put your setup far from any
60 Hz source and have no ground loops or even
no weak grounds anywhere in you setup.
Lastly, the hard part about STM is getting
meaningful data. You typically get junctions that
aren't so good and you need to be able to tell
whether it is the tip or the surface. Generally
to do that you need to do this for a few years and
build up and internal reference for which type
of crappy junction corresponds to which problem.
Then getting a good junction and some data becomes
easier.
anybody know if Spirit made it? (Score:1, Offtopic)
Re: (Score:1)
Re:anybody know if Spirit made it? (Score:1)
This might be handy for... (Score:3, Interesting)
If nothing else, it might be cool to build one just to look at stuff, and I finally have a use for that ISA slot.
-cp-
President Bush to Liberate Alaska! [alaska-freegold.com]
Re:This might be handy for... (Score:2)
702 related articles (Score:2)
you will have to go through few of these to get to details.
You Must Use This 30000x Power Only For Good (Score:3, Funny)
For a horrible, horrible moment, I read the headline as "Build Your Own Spamming Tunneling Microscope."
Just think what horrid new forms of viral marketing a research tool like that could help develop.
open source but not FSF-style free (Score:3, Informative)
Re:I'm just curious... (Score:1, Funny)
Re:I'm just curious... (Score:1)
They would have a hard time enforcing it (Score:1, Insightful)
Just publishing a seperate license without requiring agreement before downloading is unlikely to stand up.
Re:They would have a hard time enforcing it (Score:3, Insightful)
By your logic I can do anything I want because I didn't explicitly agree to the GPL and never signed anything that stated I would not use the software if I didn't agree to the GPL.
Re:They would have a hard time enforcing it (Score:4, Informative)
The GPL only kicks in when you *distribute* copies of the software. In this case if you choose to ignore the GPL, copyright law defaults to 'you are not allowed to distribute the software'. Hence the *only* legal way to distribute (note: I didn't say 'use') GPL'd software is to agree to the GPL.
Re:They would have a hard time enforcing it (Score:1)
In the hardware world, it doesnt work the same. This microscope could be protected under the "industrial designs and dr
Re:They would have a hard time enforcing it (Score:2)
Under copyright law, having the copy is enough to let you use it, however you can't modify it, or distribute it ANY fashion. So it's sort of a moot point wouldn't you say?
Re:I'm just curious... (Score:1)
Scrap their mouth looking for viral inclusion?
Trace out the path on their microchips?
Make some kick-ass art?
Maybe plans like this would allow a poor researcher get started in his/her work before the grant money started rolling in...
I'm an ultra science geek... but I can't figure out anything I would want to do with this.
AC
Re:I'm just curious... (Score:4, Funny)
Re:I'm just curious... (Score:2)
Re:I'm just curious... (Score:1)
When you finally get that 100000000x closeup of fly nuts, it will say, "Cotcha Pirate!"
Re:I'm just curious... (Score:5, Interesting)
Unless they have patents, there is nothing they can do to stop someone from building a microscope using their plans. The only thing they can do is stop you from copying the plans themselves (under copyright law).
John D. Alexander, the inventor of the disk scanner, also has a 'free' STM design [geocities.com] on the web. Incidentally, this guy took out a patent on the disk scanner [geocities.com], then withdrew the patent application [uspto.gov]! Now that's a smart way to make sure others cannot lock up a design with patents (or he just ran out of money).
Re:I'm just curious... (Score:3, Interesting)
Get ready to patent everything from pointers to linked lists to schedulers to drawing algorithms... (and before you mention there is prior art, that's not stopping anyone else now is it?)
Re:I'm just curious... (Score:2)
Re:I'm just curious... (Score:2, Funny)
Re:sigh (Score:1)
How about a category? Was: Re:DUPE!!!!! (Score:2)
Re:How about a category? Was: Re:DUPE!!!!! (Score:1)
Re:It's a stupid license anyways (Score:5, Insightful)
You're getting this information for FREE. It hurts you not at all to have such a 'stupid' license, because previously, you didn't have the information at all. By every imaginable definition of the concept, you have more available to you now than you did previously.
You have no justification for being so bitter. In this era of jealously defended "intellectual property", ANYONE giving anything away deserves commendation.. not derision.
Re:It's a stupid license anyways (Score:2)
check out a book by Julian Chen "Introduction to Scanning Tunneling Microscopy"
ASIN: 0195071506.
It's the bible of STM. It will tell you more or
less everything you need to know to build one
except may electronics but it will give you
plenty of pointers to that too.
Most of the information on that site is either
in the book or a design that can be made with info
from the book rather trivially. They have done a
fine job but their IP is not worth much even as
a giveaway.
Reality Check :It's a stupid license anyways (Score:2)
He's renting you the skills and time to assemble it.
Same as if you bought a kit RC helicopter, and then paid the geek to build it.
You didn't buy the kit from him
You didn't buy an assembled product from him
You merely contracted his labor to assemble the device.
I don't know why you'd need 200 of these for personal use, and if you're an educational
Re:It's a stupid license anyways (Score:2)
I think your definition of "commercial purposes" is a little narrow. There's a big difference between who constructs the 'scope and what the 'scope is used for. Gathering the parts and then having your local geeky kid build it for you is not, IMHO, commercial. In essence you're contracting the geeky kid to assemble your pile of parts into a working 'scope - he's not "offering a fully assembled device for sale".
If you offer STM services for $100/sample, that's commercial use of the design/device.
Re:This is a dup, from over a year ago! (Score:2)